Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.26□□□□□ -0.13
Rab43Q8CG50 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.26□□□□□ -0.13
Rab43Q8CG50 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.26□□□□□ -0.13
Rab43Q8CG50 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.26□□□□□ -0.13
Rab43Q8CG50 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Gm24694-201ENSMUST00000180054 110 ntBASIC14.26□□□□□ -0.13
Rab43Q8CG50 Gm27663-201ENSMUST00000184839 110 ntBASIC14.26□□□□□ -0.13
Rab43Q8CG50 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Gm46209-201ENSMUST00000217912 553 ntBASIC14.26□□□□□ -0.13
Rab43Q8CG50 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Asic1-205ENSMUST00000228185 1818 ntBASIC14.26□□□□□ -0.13
Rab43Q8CG50 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab43Q8CG50 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Dupd1-202ENSMUST00000224735 548 ntBASIC14.25□□□□□ -0.13
Rab43Q8CG50 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rab43Q8CG50 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.24□□□□□ -0.13
Rab43Q8CG50 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.24□□□□□ -0.13
Rab43Q8CG50 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Gm16476-201ENSMUST00000221544 139 ntBASIC14.24□□□□□ -0.13
Rab43Q8CG50 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rab43Q8CG50 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms