Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc5Q8CG46 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Gm10060-201ENSMUST00000212002 111 ntBASIC18.09■□□□□ 0.49
Smc5Q8CG46 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.09■□□□□ 0.49
Smc5Q8CG46 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 CT030684.3-201ENSMUST00000227308 2445 ntBASIC18.09■□□□□ 0.49
Smc5Q8CG46 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc5Q8CG46 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.08■□□□□ 0.49
Smc5Q8CG46 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc5Q8CG46 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Smc5Q8CG46 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc5Q8CG46 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc5Q8CG46 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc5Q8CG46 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc5Q8CG46 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Smc5Q8CG46 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc5Q8CG46 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc5Q8CG46 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.08■□□□□ 0.48
Smc5Q8CG46 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc5Q8CG46 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.07■□□□□ 0.48
Smc5Q8CG46 Gm16026-204ENSMUST00000162652 683 ntBASIC18.07■□□□□ 0.48
Smc5Q8CG46 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc5Q8CG46 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.06■□□□□ 0.48
Smc5Q8CG46 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms