Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc28bQ8CEG5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Gm23634-201ENSMUST00000175071 91 ntBASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc28bQ8CEG5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Gm8097-201ENSMUST00000117903 829 ntBASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc28bQ8CEG5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc28bQ8CEG5 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.46□□□□□ -0.1
Ccdc28bQ8CEG5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.46□□□□□ -0.1
Ccdc28bQ8CEG5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 AA414768-201ENSMUST00000121924 1257 ntBASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms