Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps53Q8CCB4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Mir7023-201ENSMUST00000185093 64 ntBASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps53Q8CCB4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps53Q8CCB4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps53Q8CCB4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps53Q8CCB4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps53Q8CCB4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.02■□□□□ 0.31
Vps53Q8CCB4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps53Q8CCB4 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.02■□□□□ 0.31
Vps53Q8CCB4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps53Q8CCB4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Gm43474-201ENSMUST00000196415 774 ntBASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Gm18246-201ENSMUST00000221023 728 ntBASIC17.01■□□□□ 0.31
Vps53Q8CCB4 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps53Q8CCB4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Vps53Q8CCB4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Vps53Q8CCB4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vps53Q8CCB4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Gm18889-201ENSMUST00000174284 929 ntBASIC17■□□□□ 0.31
Vps53Q8CCB4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17■□□□□ 0.31
Vps53Q8CCB4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Gpr146-202ENSMUST00000053120 1040 ntBASIC17■□□□□ 0.31
Vps53Q8CCB4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17■□□□□ 0.31
Vps53Q8CCB4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps53Q8CCB4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Gm25948-201ENSMUST00000175334 112 ntBASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps53Q8CCB4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps53Q8CCB4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms