Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tsen54Q8C2A2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tsen54Q8C2A2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tsen54Q8C2A2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tsen54Q8C2A2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Tsen54Q8C2A2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Tsen54Q8C2A2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tsen54Q8C2A2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Gm15165-201ENSMUST00000118140 502 ntBASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Gm17971-201ENSMUST00000190239 806 ntBASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Carlr-201ENSMUST00000181515 2574 ntBASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tsen54Q8C2A2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms