Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Gm7895-201ENSMUST00000187459 1173 ntBASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Snora73a-201ENSMUST00000082453 205 ntBASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pbrm1Q8BSQ9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pbrm1Q8BSQ9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Pbrm1Q8BSQ9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Pbrm1Q8BSQ9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
Pbrm1Q8BSQ9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Gm6334-201ENSMUST00000207083 228 ntBASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Gm18935-201ENSMUST00000212692 664 ntBASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Gm37166-201ENSMUST00000195473 2474 ntBASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pbrm1Q8BSQ9 Gm9109-201ENSMUST00000120254 1405 ntBASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pbrm1Q8BSQ9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm12241-201ENSMUST00000118330 726 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm11658-201ENSMUST00000120913 1008 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm2467-201ENSMUST00000182266 1010 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm6981-201ENSMUST00000182467 1008 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm45865-201ENSMUST00000211815 945 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Ssr1-204ENSMUST00000225319 1610 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm13730-201ENSMUST00000121036 1462 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 AC155637.1-201ENSMUST00000218560 636 ntBASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pbrm1Q8BSQ9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Gm14780-201ENSMUST00000118387 2737 ntBASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Mir877-201ENSMUST00000104738 85 ntBASIC22.23■■□□□ 1.15
Pbrm1Q8BSQ9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms