Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scfd1Q8BRF7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scfd1Q8BRF7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scfd1Q8BRF7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Scfd1Q8BRF7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scfd1Q8BRF7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scfd1Q8BRF7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scfd1Q8BRF7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Gm23547-201ENSMUST00000158210 271 ntBASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Gm16215-201ENSMUST00000161990 637 ntBASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 BC001981-202ENSMUST00000191393 1545 ntBASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scfd1Q8BRF7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Sybu-209ENSMUST00000228639 4113 ntBASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Gm4875-201ENSMUST00000118257 786 ntBASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Gm9229-201ENSMUST00000222777 126 ntBASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scfd1Q8BRF7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gm15321-201ENSMUST00000121290 288 ntBASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gm24694-201ENSMUST00000180054 110 ntBASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gm27663-201ENSMUST00000184839 110 ntBASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Scfd1Q8BRF7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scfd1Q8BRF7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms