Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco3Q8BQM7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Gm9172-201ENSMUST00000212092 954 ntBASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Smco3Q8BQM7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Gm9013-201ENSMUST00000132939 882 ntBASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smco3Q8BQM7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms