Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ckap4Q8BMK4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Gm11764-201ENSMUST00000120221 623 ntBASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.88□□□□□ -0.19
Ckap4Q8BMK4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ckap4Q8BMK4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 AV026068-213ENSMUST00000223675 1171 ntBASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ckap4Q8BMK4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms