Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Gm8000-201ENSMUST00000188378 592 ntBASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Csnk1a1Q8BK63 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Gm14494-201ENSMUST00000118786 435 ntBASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Gm9726-201ENSMUST00000180321 678 ntBASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Csnk1a1Q8BK63 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Gm10605-202ENSMUST00000183019 3198 ntBASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Gm27525-201ENSMUST00000184465 107 ntBASIC13□□□□□ -0.33
Csnk1a1Q8BK63 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Gm5264-201ENSMUST00000190584 848 ntBASIC13□□□□□ -0.33
Csnk1a1Q8BK63 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Csnk1a1Q8BK63 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms