Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3bQ8BHK2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3bQ8BHK2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3bQ8BHK2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3bQ8BHK2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3bQ8BHK2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn3bQ8BHK2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Scn3bQ8BHK2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Gm6345-202ENSMUST00000180900 204 ntBASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Gm8655-201ENSMUST00000221159 852 ntBASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn3bQ8BHK2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.6□□□□□ -0.23
Scn3bQ8BHK2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Gm6433-201ENSMUST00000118634 875 ntBASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn3bQ8BHK2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms