Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk3bQ80YF6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Gm14859-201ENSMUST00000117752 357 ntBASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.38□□□□□ -0.43
Upk3bQ80YF6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk3bQ80YF6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Gm13836-201ENSMUST00000121159 501 ntBASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Gm7787-201ENSMUST00000216858 688 ntBASIC12.37□□□□□ -0.43
Upk3bQ80YF6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk3bQ80YF6 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.37□□□□□ -0.43
Upk3bQ80YF6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk3bQ80YF6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms