Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.07□□□□□ -0.16
Otop1Q80VM9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Otop1Q80VM9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otop1Q80VM9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Otop1Q80VM9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otop1Q80VM9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otop1Q80VM9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Otop1Q80VM9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Gm23984-201ENSMUST00000157139 203 ntBASIC14.06□□□□□ -0.16
Otop1Q80VM9 Gm29667-201ENSMUST00000190817 490 ntBASIC14.06□□□□□ -0.16
Otop1Q80VM9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otop1Q80VM9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Shd-206ENSMUST00000225145 998 ntBASIC14.05□□□□□ -0.16
Otop1Q80VM9 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.05□□□□□ -0.16
Otop1Q80VM9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.05□□□□□ -0.16
Otop1Q80VM9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.05□□□□□ -0.16
Otop1Q80VM9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.05□□□□□ -0.16
Otop1Q80VM9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otop1Q80VM9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.04□□□□□ -0.16
Otop1Q80VM9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Otop1Q80VM9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Gm5566-201ENSMUST00000116118 459 ntBASIC14.04□□□□□ -0.16
Otop1Q80VM9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Gm9719-201ENSMUST00000162765 543 ntBASIC14.04□□□□□ -0.16
Otop1Q80VM9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Gm8515-201ENSMUST00000194852 576 ntBASIC14.04□□□□□ -0.16
Otop1Q80VM9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Gm45384-201ENSMUST00000210451 277 ntBASIC14.04□□□□□ -0.16
Otop1Q80VM9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.04□□□□□ -0.16
Otop1Q80VM9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Otop1Q80VM9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms