Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3d21Q7TSG5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3d21Q7TSG5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Carlr-201ENSMUST00000181515 2574 ntBASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sh3d21Q7TSG5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Gm15427-201ENSMUST00000117288 531 ntBASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Gm13464-201ENSMUST00000119418 935 ntBASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sh3d21Q7TSG5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sh3d21Q7TSG5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms