Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.3□□□□□ -0.44
Rif1Q6PR54 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rif1Q6PR54 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Gm8566-201ENSMUST00000120174 465 ntBASIC12.29□□□□□ -0.44
Rif1Q6PR54 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Rif1Q6PR54 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Gm12241-201ENSMUST00000118330 726 ntBASIC12.28□□□□□ -0.44
Rif1Q6PR54 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.28□□□□□ -0.44
Rif1Q6PR54 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Snora73a-201ENSMUST00000082453 205 ntBASIC12.28□□□□□ -0.44
Rif1Q6PR54 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.28□□□□□ -0.44
Rif1Q6PR54 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rif1Q6PR54 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.28□□□□□ -0.44
Rif1Q6PR54 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.28□□□□□ -0.44
Rif1Q6PR54 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.28□□□□□ -0.44
Rif1Q6PR54 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rif1Q6PR54 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.27□□□□□ -0.44
Rif1Q6PR54 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.27□□□□□ -0.44
Rif1Q6PR54 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.27□□□□□ -0.44
Rif1Q6PR54 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rif1Q6PR54 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rif1Q6PR54 Gm13047-201ENSMUST00000117116 815 ntBASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms