Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nup98Q6PFD9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17■□□□□ 0.31
Nup98Q6PFD9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Nup98Q6PFD9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Gm2495-201ENSMUST00000191160 466 ntBASIC17■□□□□ 0.31
Nup98Q6PFD9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup98Q6PFD9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17■□□□□ 0.31
Nup98Q6PFD9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Gm4804-201ENSMUST00000182234 999 ntBASIC16.99■□□□□ 0.31
Nup98Q6PFD9 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.99■□□□□ 0.31
Nup98Q6PFD9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nup98Q6PFD9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Gm26464-201ENSMUST00000157094 305 ntBASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Gm37714-201ENSMUST00000194742 342 ntBASIC16.98■□□□□ 0.31
Nup98Q6PFD9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Gm15240-201ENSMUST00000118156 720 ntBASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Mir7654-201ENSMUST00000185082 70 ntBASIC16.98■□□□□ 0.31
Nup98Q6PFD9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Gm8463-201ENSMUST00000208573 613 ntBASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup98Q6PFD9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup98Q6PFD9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nup98Q6PFD9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms