Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf220Q6PDX6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf220Q6PDX6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rnf220Q6PDX6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Gm6345-202ENSMUST00000180900 204 ntBASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Gm45328-201ENSMUST00000210942 917 ntBASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf220Q6PDX6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.88□□□□□ -0.19
Rnf220Q6PDX6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms