Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.6■□□□□ 0.09
ShbQ6PD21 Gm38002-201ENSMUST00000193255 180 ntBASIC15.6■□□□□ 0.09
ShbQ6PD21 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ShbQ6PD21 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ShbQ6PD21 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.6■□□□□ 0.09
ShbQ6PD21 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ShbQ6PD21 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ShbQ6PD21 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.59■□□□□ 0.09
ShbQ6PD21 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Gm38266-201ENSMUST00000194931 421 ntBASIC15.59■□□□□ 0.09
ShbQ6PD21 Gm44397-201ENSMUST00000195950 113 ntBASIC15.59■□□□□ 0.09
ShbQ6PD21 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.59■□□□□ 0.09
ShbQ6PD21 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.59■□□□□ 0.09
ShbQ6PD21 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ShbQ6PD21 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ShbQ6PD21 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
ShbQ6PD21 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ShbQ6PD21 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Gm22018-201ENSMUST00000104357 131 ntBASIC15.58■□□□□ 0.08
ShbQ6PD21 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.58■□□□□ 0.08
ShbQ6PD21 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.58■□□□□ 0.08
ShbQ6PD21 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.58■□□□□ 0.08
ShbQ6PD21 Gm37714-201ENSMUST00000194742 342 ntBASIC15.58■□□□□ 0.08
ShbQ6PD21 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.58■□□□□ 0.08
ShbQ6PD21 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
ShbQ6PD21 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.58■□□□□ 0.08
ShbQ6PD21 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.58■□□□□ 0.08
ShbQ6PD21 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
ShbQ6PD21 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ShbQ6PD21 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ShbQ6PD21 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ShbQ6PD21 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.57■□□□□ 0.08
ShbQ6PD21 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.57■□□□□ 0.08
ShbQ6PD21 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm43118-201ENSMUST00000199149 775 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Gm8598-201ENSMUST00000221184 836 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.57■□□□□ 0.08
ShbQ6PD21 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ShbQ6PD21 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms