Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sp140Q6NSQ5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sp140Q6NSQ5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sp140Q6NSQ5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sp140Q6NSQ5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sp140Q6NSQ5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms