Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Krt42Q6IFX2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.04■□□□□ -0
Krt42Q6IFX2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Krt42Q6IFX2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Krt42Q6IFX2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.03■□□□□ -0
Krt42Q6IFX2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.03■□□□□ -0
Krt42Q6IFX2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.03■□□□□ -0
Krt42Q6IFX2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Krt42Q6IFX2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Krt42Q6IFX2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.03■□□□□ -0
Krt42Q6IFX2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.03■□□□□ -0
Krt42Q6IFX2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.03■□□□□ -0
Krt42Q6IFX2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Krt42Q6IFX2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.03■□□□□ -0
Krt42Q6IFX2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Krt42Q6IFX2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Krt42Q6IFX2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Krt42Q6IFX2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.02■□□□□ -0
Krt42Q6IFX2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Krt42Q6IFX2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Krt42Q6IFX2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Krt42Q6IFX2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Krt42Q6IFX2 Gm5184-201ENSMUST00000220417 1702 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms