Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scube3Q66PY1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.38■□□□□ 0.05
Scube3Q66PY1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Scube3Q66PY1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.38■□□□□ 0.05
Scube3Q66PY1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.38■□□□□ 0.05
Scube3Q66PY1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scube3Q66PY1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.37■□□□□ 0.05
Scube3Q66PY1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.37■□□□□ 0.05
Scube3Q66PY1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scube3Q66PY1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.36■□□□□ 0.05
Scube3Q66PY1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.36■□□□□ 0.05
Scube3Q66PY1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.36■□□□□ 0.05
Scube3Q66PY1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms