Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.24■□□□□ 0.83
Knl1Q66JQ7 AC102291.3-201ENSMUST00000226566 405 ntBASIC20.24■□□□□ 0.83
Knl1Q66JQ7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Knl1Q66JQ7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Gm13385-201ENSMUST00000121089 220 ntBASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Knl1Q66JQ7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Gm27331-201ENSMUST00000183705 60 ntBASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Gm43758-201ENSMUST00000199500 367 ntBASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Gm7783-201ENSMUST00000204795 781 ntBASIC20.22■□□□□ 0.83
Knl1Q66JQ7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Gm24526-201ENSMUST00000082921 158 ntBASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Ankra2-208ENSMUST00000226100 1476 ntBASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Knl1Q66JQ7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Gm44397-201ENSMUST00000195950 113 ntBASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Gm43822-201ENSMUST00000200285 476 ntBASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Gm18027-201ENSMUST00000218947 619 ntBASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Knl1Q66JQ7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Gm22331-201ENSMUST00000158066 136 ntBASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Knl1Q66JQ7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms