Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm8396-201ENSMUST00000057361 823 ntBASIC14.09□□□□□ -0.15
Sdc3Q64519 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.09□□□□□ -0.15
Sdc3Q64519 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc3Q64519 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc3Q64519 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc3Q64519 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc3Q64519 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc3Q64519 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sdc3Q64519 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Sdc3Q64519 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sdc3Q64519 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Sdc3Q64519 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Sdc3Q64519 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sdc3Q64519 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sdc3Q64519 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.08□□□□□ -0.16
Sdc3Q64519 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sdc3Q64519 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.08□□□□□ -0.16
Sdc3Q64519 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.08□□□□□ -0.16
Sdc3Q64519 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.08□□□□□ -0.16
Sdc3Q64519 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.08□□□□□ -0.16
Sdc3Q64519 Gm16026-204ENSMUST00000162652 683 ntBASIC14.08□□□□□ -0.16
Sdc3Q64519 Gm43767-201ENSMUST00000198933 381 ntBASIC14.08□□□□□ -0.16
Sdc3Q64519 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sdc3Q64519 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.08□□□□□ -0.16
Sdc3Q64519 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sdc3Q64519 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.08□□□□□ -0.16
Sdc3Q64519 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.08□□□□□ -0.16
Sdc3Q64519 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.08□□□□□ -0.16
Sdc3Q64519 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sdc3Q64519 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.08□□□□□ -0.16
Sdc3Q64519 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.07□□□□□ -0.16
Sdc3Q64519 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.07□□□□□ -0.16
Sdc3Q64519 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Gm6973-201ENSMUST00000117080 721 ntBASIC14.07□□□□□ -0.16
Sdc3Q64519 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.07□□□□□ -0.16
Sdc3Q64519 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Gm18057-201ENSMUST00000208220 503 ntBASIC14.07□□□□□ -0.16
Sdc3Q64519 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sdc3Q64519 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sdc3Q64519 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.06□□□□□ -0.16
Sdc3Q64519 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.06□□□□□ -0.16
Sdc3Q64519 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sdc3Q64519 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.06□□□□□ -0.16
Sdc3Q64519 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms