Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six3Q62233 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.31□□□□□ -0.12
Six3Q62233 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.31□□□□□ -0.12
Six3Q62233 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.31□□□□□ -0.12
Six3Q62233 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.31□□□□□ -0.12
Six3Q62233 Gm18195-201ENSMUST00000207604 706 ntBASIC14.31□□□□□ -0.12
Six3Q62233 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.31□□□□□ -0.12
Six3Q62233 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.31□□□□□ -0.12
Six3Q62233 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.31□□□□□ -0.12
Six3Q62233 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Six3Q62233 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.31□□□□□ -0.12
Six3Q62233 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Six3Q62233 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Six3Q62233 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Six3Q62233 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Six3Q62233 Gm13464-201ENSMUST00000119418 935 ntBASIC14.3□□□□□ -0.12
Six3Q62233 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Gm9726-201ENSMUST00000180321 678 ntBASIC14.3□□□□□ -0.12
Six3Q62233 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.3□□□□□ -0.12
Six3Q62233 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.3□□□□□ -0.12
Six3Q62233 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Six3Q62233 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Six3Q62233 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Gm8749-201ENSMUST00000117737 331 ntBASIC14.29□□□□□ -0.12
Six3Q62233 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.29□□□□□ -0.12
Six3Q62233 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.29□□□□□ -0.12
Six3Q62233 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.29□□□□□ -0.12
Six3Q62233 Gm2651-201ENSMUST00000203560 838 ntBASIC14.29□□□□□ -0.12
Six3Q62233 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.29□□□□□ -0.12
Six3Q62233 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Six3Q62233 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.29□□□□□ -0.12
Six3Q62233 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms