Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rai1Q61818 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rai1Q61818 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rai1Q61818 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rai1Q61818 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rai1Q61818 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rai1Q61818 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rai1Q61818 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rai1Q61818 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rai1Q61818 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rai1Q61818 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.96□□□□□ -0.18
Rai1Q61818 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rai1Q61818 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Rai1Q61818 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rai1Q61818 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rai1Q61818 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rai1Q61818 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Rai1Q61818 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Gm8463-201ENSMUST00000208573 613 ntBASIC13.95□□□□□ -0.18
Rai1Q61818 Gm17795-201ENSMUST00000214505 757 ntBASIC13.95□□□□□ -0.18
Rai1Q61818 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rai1Q61818 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.95□□□□□ -0.18
Rai1Q61818 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.95□□□□□ -0.18
Rai1Q61818 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rai1Q61818 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.95□□□□□ -0.18
Rai1Q61818 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.95□□□□□ -0.18
Rai1Q61818 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rai1Q61818 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.95□□□□□ -0.18
Rai1Q61818 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rai1Q61818 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rai1Q61818 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rai1Q61818 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rai1Q61818 Gm18027-201ENSMUST00000218947 619 ntBASIC13.94□□□□□ -0.18
Rai1Q61818 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Rai1Q61818 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rai1Q61818 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rai1Q61818 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.93□□□□□ -0.18
Rai1Q61818 Gm28911-201ENSMUST00000188837 117 ntBASIC13.93□□□□□ -0.18
Rai1Q61818 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.93□□□□□ -0.18
Rai1Q61818 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.93□□□□□ -0.18
Rai1Q61818 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.93□□□□□ -0.18
Rai1Q61818 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Carlr-201ENSMUST00000181515 2574 ntBASIC13.93□□□□□ -0.18
Rai1Q61818 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Rai1Q61818 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rai1Q61818 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Gm11425-201ENSMUST00000119608 498 ntBASIC13.93□□□□□ -0.18
Rai1Q61818 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rai1Q61818 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.93□□□□□ -0.18
Rai1Q61818 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms