Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Gm13823-201ENSMUST00000119930 345 ntBASIC15.24■□□□□ 0.03
Smarcd1Q61466 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Smarcd1Q61466 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.24■□□□□ 0.03
Smarcd1Q61466 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcd1Q61466 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcd1Q61466 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.22■□□□□ 0.03
Smarcd1Q61466 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcd1Q61466 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd1Q61466 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.22■□□□□ 0.03
Smarcd1Q61466 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm29310-201ENSMUST00000185468 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21825-201ENSMUST00000185728 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm29109-201ENSMUST00000185895 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21896-201ENSMUST00000186520 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21873-201ENSMUST00000186728 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21794-201ENSMUST00000187056 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21880-201ENSMUST00000187275 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21826-201ENSMUST00000187451 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21198-201ENSMUST00000188393 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21749-201ENSMUST00000189343 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21901-201ENSMUST00000189568 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm29424-201ENSMUST00000189716 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm28599-201ENSMUST00000189838 694 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21867-201ENSMUST00000189917 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm29269-201ENSMUST00000190087 696 ntBASIC15.21■□□□□ 0.03
Smarcd1Q61466 Gm21722-201ENSMUST00000190153 696 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms