Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Six4Q61321 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.76□□□□□ -0.05
Six4Q61321 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Six4Q61321 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.75□□□□□ -0.05
Six4Q61321 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
Six4Q61321 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Six4Q61321 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Six4Q61321 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.75□□□□□ -0.05
Six4Q61321 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.75□□□□□ -0.05
Six4Q61321 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.75□□□□□ -0.05
Six4Q61321 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.75□□□□□ -0.05
Six4Q61321 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.75□□□□□ -0.05
Six4Q61321 Gm38225-201ENSMUST00000194001 393 ntBASIC14.75□□□□□ -0.05
Six4Q61321 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.75□□□□□ -0.05
Six4Q61321 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Six4Q61321 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Six4Q61321 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.74□□□□□ -0.05
Six4Q61321 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.74□□□□□ -0.05
Six4Q61321 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Gm13015-201ENSMUST00000118674 204 ntBASIC14.74□□□□□ -0.05
Six4Q61321 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Six4Q61321 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Six4Q61321 Gm18737-201ENSMUST00000173594 937 ntBASIC14.74□□□□□ -0.05
Six4Q61321 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.74□□□□□ -0.05
Six4Q61321 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Gm9182-201ENSMUST00000217829 639 ntBASIC14.74□□□□□ -0.05
Six4Q61321 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Six4Q61321 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Six4Q61321 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Six4Q61321 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Six4Q61321 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Six4Q61321 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Six4Q61321 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.73□□□□□ -0.05
Six4Q61321 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Gm26308-201ENSMUST00000157768 69 ntBASIC14.73□□□□□ -0.05
Six4Q61321 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.73□□□□□ -0.05
Six4Q61321 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Six4Q61321 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.73□□□□□ -0.05
Six4Q61321 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.73□□□□□ -0.05
Six4Q61321 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.73□□□□□ -0.05
Six4Q61321 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Six4Q61321 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Six4Q61321 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Six4Q61321 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Six4Q61321 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms