Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.2□□□□□ -0.14
Col12a1Q60847 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col12a1Q60847 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col12a1Q60847 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 AU022133-201ENSMUST00000200601 873 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm6983-201ENSMUST00000214912 628 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm3222-201ENSMUST00000071282 990 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Snora73a-201ENSMUST00000082453 205 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Col12a1Q60847 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm11524-201ENSMUST00000119349 807 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col12a1Q60847 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col12a1Q60847 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.19□□□□□ -0.14
Col12a1Q60847 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col12a1Q60847 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col12a1Q60847 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col12a1Q60847 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.18□□□□□ -0.14
Col12a1Q60847 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.18□□□□□ -0.14
Col12a1Q60847 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col12a1Q60847 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col12a1Q60847 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col12a1Q60847 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Gm14263-201ENSMUST00000117955 746 ntBASIC14.18□□□□□ -0.14
Col12a1Q60847 Gm12997-201ENSMUST00000120207 640 ntBASIC14.18□□□□□ -0.14
Col12a1Q60847 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Col12a1Q60847 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col12a1Q60847 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.17□□□□□ -0.14
Col12a1Q60847 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.17□□□□□ -0.14
Col12a1Q60847 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Gm11803-201ENSMUST00000119966 444 ntBASIC14.17□□□□□ -0.14
Col12a1Q60847 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col12a1Q60847 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Col12a1Q60847 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms