Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gm15321-201ENSMUST00000121290 288 ntBASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gm29667-201ENSMUST00000190817 490 ntBASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gm20445-201ENSMUST00000061905 565 ntBASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.82□□□□□ -0.36
Trav6-2Q5R1I4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Gm4875-201ENSMUST00000118257 786 ntBASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Gm28631-201ENSMUST00000190740 334 ntBASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Gm37230-201ENSMUST00000194491 818 ntBASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Gm6218-201ENSMUST00000219812 628 ntBASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Gm9229-201ENSMUST00000222777 126 ntBASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-2Q5R1I4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms