Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav8d-1Q5R1H8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Gm12008-201ENSMUST00000117791 755 ntBASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Rps4l-201ENSMUST00000071745 943 ntBASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav8d-1Q5R1H8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Gm34391-201ENSMUST00000203706 907 ntBASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Grk6-207ENSMUST00000225925 2769 ntBASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav8d-1Q5R1H8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms