Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Gm10275-202ENSMUST00000168697 495 ntBASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Gm10275-201ENSMUST00000092620 635 ntBASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav8d-2Q5R1B6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Gm27486-201ENSMUST00000184923 80 ntBASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.14□□□□□ -0.15
Trav8d-2Q5R1B6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Dancr-204ENSMUST00000132389 2347 ntBASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 App-207ENSMUST00000227737 2827 ntBASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav8d-2Q5R1B6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms