Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rc3h1Q4VGL6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rc3h1Q4VGL6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Gm6222-201ENSMUST00000120787 396 ntBASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Gm14767-201ENSMUST00000121559 586 ntBASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Gm27680-201ENSMUST00000184192 160 ntBASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rc3h1Q4VGL6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Gm15487-201ENSMUST00000122373 465 ntBASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Dupd1-202ENSMUST00000224735 548 ntBASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rc3h1Q4VGL6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms