Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.89■□□□□ 0.46
Shank3Q4ACU6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Shank3Q4ACU6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.89■□□□□ 0.45
Shank3Q4ACU6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Gm3786-201ENSMUST00000202659 378 ntBASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Shank3Q4ACU6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.88■□□□□ 0.45
Shank3Q4ACU6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shank3Q4ACU6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.87■□□□□ 0.45
Shank3Q4ACU6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shank3Q4ACU6 Gm12485-201ENSMUST00000119641 291 ntBASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.86■□□□□ 0.45
Shank3Q4ACU6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Proscos-202ENSMUST00000178990 666 ntBASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.85■□□□□ 0.45
Shank3Q4ACU6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.84■□□□□ 0.45
Shank3Q4ACU6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms