Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cks1brtQ3UNC9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1brtQ3UNC9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1brtQ3UNC9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1brtQ3UNC9 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1brtQ3UNC9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1brtQ3UNC9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1brtQ3UNC9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1brtQ3UNC9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Cks1brtQ3UNC9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Cks1brtQ3UNC9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.52□□□□□ -0.72
Cks1brtQ3UNC9 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.52□□□□□ -0.72
Cks1brtQ3UNC9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cks1brtQ3UNC9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cks1brtQ3UNC9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Gm42569-201ENSMUST00000200539 472 ntBASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1brtQ3UNC9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms