Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Gm16198-201ENSMUST00000118766 670 ntBASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf2Q3UAW9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Gm8749-201ENSMUST00000117737 331 ntBASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Gm16026-204ENSMUST00000162652 683 ntBASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf2Q3UAW9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Brf2Q3UAW9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Brf2Q3UAW9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brf2Q3UAW9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Brf2Q3UAW9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Brf2Q3UAW9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms