Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Gm5187-201ENSMUST00000117317 991 ntBASIC17.14■□□□□ 0.33
Col5a2Q3U962 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Gm11524-201ENSMUST00000119349 807 ntBASIC17.14■□□□□ 0.33
Col5a2Q3U962 Gm15376-201ENSMUST00000122258 783 ntBASIC17.14■□□□□ 0.33
Col5a2Q3U962 Gm26464-201ENSMUST00000157094 305 ntBASIC17.14■□□□□ 0.33
Col5a2Q3U962 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col5a2Q3U962 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.14■□□□□ 0.33
Col5a2Q3U962 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col5a2Q3U962 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Gm12928-201ENSMUST00000117115 573 ntBASIC17.13■□□□□ 0.33
Col5a2Q3U962 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.13■□□□□ 0.33
Col5a2Q3U962 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col5a2Q3U962 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.13■□□□□ 0.33
Col5a2Q3U962 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Olfr582-201ENSMUST00000098212 960 ntBASIC17.13■□□□□ 0.33
Col5a2Q3U962 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.13■□□□□ 0.33
Col5a2Q3U962 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Col5a2Q3U962 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.12■□□□□ 0.33
Col5a2Q3U962 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Mir8109-201ENSMUST00000184375 117 ntBASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.12■□□□□ 0.33
Col5a2Q3U962 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm7399-201ENSMUST00000032395 858 ntBASIC17.12■□□□□ 0.33
Col5a2Q3U962 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.12■□□□□ 0.33
Col5a2Q3U962 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm15957-201ENSMUST00000118893 974 ntBASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm12882-201ENSMUST00000121696 517 ntBASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.12■□□□□ 0.33
Col5a2Q3U962 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Col5a2Q3U962 Gm13612-201ENSMUST00000119276 390 ntBASIC17.11■□□□□ 0.33
Col5a2Q3U962 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.11■□□□□ 0.33
Col5a2Q3U962 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms