Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Fndc4Q3TR08 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Matn2-206ENSMUST00000228570 2798 ntBASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm25990-201ENSMUST00000102440 86 ntBASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm13418-201ENSMUST00000119097 944 ntBASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm27646-201ENSMUST00000183989 110 ntBASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm28659-201ENSMUST00000188013 759 ntBASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.51□□□□□ -0.41
Fndc4Q3TR08 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Fndc4Q3TR08 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Gm23547-201ENSMUST00000158210 271 ntBASIC12.49□□□□□ -0.41
Fndc4Q3TR08 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Gm6089-201ENSMUST00000197666 938 ntBASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Fndc4Q3TR08 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.49□□□□□ -0.41
Fndc4Q3TR08 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms