Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc4Q08624 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc4Q08624 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc4Q08624 Syt7-204ENSMUST00000223586 1344 ntBASIC14.02□□□□□ -0.17
Hoxc4Q08624 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc4Q08624 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.01□□□□□ -0.17
Hoxc4Q08624 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.01□□□□□ -0.17
Hoxc4Q08624 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Gm5866-201ENSMUST00000177881 973 ntBASIC14.01□□□□□ -0.17
Hoxc4Q08624 Gm24694-201ENSMUST00000180054 110 ntBASIC14.01□□□□□ -0.17
Hoxc4Q08624 Gm27663-201ENSMUST00000184839 110 ntBASIC14.01□□□□□ -0.17
Hoxc4Q08624 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.01□□□□□ -0.17
Hoxc4Q08624 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc4Q08624 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hoxc4Q08624 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14□□□□□ -0.17
Hoxc4Q08624 Gm14451-201ENSMUST00000121581 1542 ntBASIC14□□□□□ -0.17
Hoxc4Q08624 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Hoxc4Q08624 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc4Q08624 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hoxc4Q08624 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc4Q08624 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hoxc4Q08624 Gm7730-201ENSMUST00000212486 454 ntBASIC14□□□□□ -0.17
Hoxc4Q08624 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14□□□□□ -0.17
Hoxc4Q08624 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14□□□□□ -0.17
Hoxc4Q08624 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hoxc4Q08624 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc4Q08624 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc4Q08624 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms