Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.19□□□□□ -0.46
Tff1Q08423 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.19□□□□□ -0.46
Tff1Q08423 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tff1Q08423 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Tff1Q08423 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.19□□□□□ -0.46
Tff1Q08423 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tff1Q08423 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.19□□□□□ -0.46
Tff1Q08423 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.19□□□□□ -0.46
Tff1Q08423 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tff1Q08423 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tff1Q08423 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.19□□□□□ -0.46
Tff1Q08423 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Tff1Q08423 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tff1Q08423 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tff1Q08423 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.18□□□□□ -0.46
Tff1Q08423 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.18□□□□□ -0.46
Tff1Q08423 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.18□□□□□ -0.46
Tff1Q08423 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tff1Q08423 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Tff1Q08423 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.18□□□□□ -0.46
Tff1Q08423 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Tff1Q08423 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.18□□□□□ -0.46
Tff1Q08423 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tff1Q08423 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.18□□□□□ -0.46
Tff1Q08423 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tff1Q08423 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tff1Q08423 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tff1Q08423 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.18□□□□□ -0.46
Tff1Q08423 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tff1Q08423 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.17□□□□□ -0.46
Tff1Q08423 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Tff1Q08423 Gm13036-201ENSMUST00000117799 748 ntBASIC12.17□□□□□ -0.46
Tff1Q08423 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Tff1Q08423 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.17□□□□□ -0.46
Tff1Q08423 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
Tff1Q08423 Auts2-212ENSMUST00000178555 309 ntBASIC12.17□□□□□ -0.46
Tff1Q08423 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.17□□□□□ -0.46
Tff1Q08423 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Tff1Q08423 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tff1Q08423 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms