Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ebf1Q07802 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf1Q07802 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.84□□□□□ -0.03
Ebf1Q07802 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf1Q07802 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf1Q07802 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf1Q07802 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf1Q07802 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf1Q07802 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.83□□□□□ -0.03
Ebf1Q07802 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ebf1Q07802 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.83□□□□□ -0.04
Ebf1Q07802 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ebf1Q07802 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ebf1Q07802 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
Ebf1Q07802 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.83□□□□□ -0.04
Ebf1Q07802 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf1Q07802 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gm7488-201ENSMUST00000117148 684 ntBASIC14.82□□□□□ -0.04
Ebf1Q07802 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gm27920-201ENSMUST00000183953 96 ntBASIC14.82□□□□□ -0.04
Ebf1Q07802 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gm18766-201ENSMUST00000189811 808 ntBASIC14.82□□□□□ -0.04
Ebf1Q07802 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gm9063-201ENSMUST00000223299 582 ntBASIC14.82□□□□□ -0.04
Ebf1Q07802 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ebf1Q07802 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ebf1Q07802 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ebf1Q07802 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ebf1Q07802 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Ebf1Q07802 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.81□□□□□ -0.04
Ebf1Q07802 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Ebf1Q07802 Gm27680-201ENSMUST00000184192 160 ntBASIC14.81□□□□□ -0.04
Ebf1Q07802 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.81□□□□□ -0.04
Ebf1Q07802 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.81□□□□□ -0.04
Ebf1Q07802 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ebf1Q07802 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.81□□□□□ -0.04
Ebf1Q07802 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms