Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.85□□□□□ -0.35
Thbs3Q05895 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.85□□□□□ -0.35
Thbs3Q05895 Gm25911-201ENSMUST00000157621 56 ntBASIC12.85□□□□□ -0.35
Thbs3Q05895 Gm18737-201ENSMUST00000173594 937 ntBASIC12.85□□□□□ -0.35
Thbs3Q05895 Gm20553-201ENSMUST00000204205 844 ntBASIC12.85□□□□□ -0.35
Thbs3Q05895 Gm45098-201ENSMUST00000207179 657 ntBASIC12.85□□□□□ -0.35
Thbs3Q05895 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.85□□□□□ -0.35
Thbs3Q05895 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thbs3Q05895 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.85□□□□□ -0.35
Thbs3Q05895 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Gm11594-201ENSMUST00000122313 162 ntBASIC12.84□□□□□ -0.35
Thbs3Q05895 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.84□□□□□ -0.35
Thbs3Q05895 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Thbs3Q05895 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thbs3Q05895 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Thbs3Q05895 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thbs3Q05895 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Thbs3Q05895 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thbs3Q05895 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thbs3Q05895 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Thbs3Q05895 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thbs3Q05895 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thbs3Q05895 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thbs3Q05895 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Thbs3Q05895 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Gm12134-201ENSMUST00000122109 520 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 Mir1895-201ENSMUST00000122615 79 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Rprl2-201ENSMUST00000157150 290 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 Gm5479-201ENSMUST00000160578 435 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Gm27920-201ENSMUST00000183953 96 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 Gm27494-201ENSMUST00000184735 189 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 Gm2213-201ENSMUST00000197485 688 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.83□□□□□ -0.36
Thbs3Q05895 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.83□□□□□ -0.36
Thbs3Q05895 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Thbs3Q05895 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.82□□□□□ -0.36
Thbs3Q05895 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms