Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Gm8749-201ENSMUST00000117737 331 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Gm9726-201ENSMUST00000180321 678 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Gm6376-201ENSMUST00000209407 580 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Rps4l-201ENSMUST00000071745 943 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.94□□□□□ -0.18
Cxcr5Q04683 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cxcr5Q04683 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gm15173-201ENSMUST00000122049 433 ntBASIC13.93□□□□□ -0.18
Cxcr5Q04683 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gm27459-201ENSMUST00000184860 107 ntBASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gm6550-201ENSMUST00000187574 993 ntBASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gm34391-201ENSMUST00000203706 907 ntBASIC13.93□□□□□ -0.18
Cxcr5Q04683 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.93□□□□□ -0.18
Cxcr5Q04683 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcr5Q04683 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.93□□□□□ -0.18
Cxcr5Q04683 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.92□□□□□ -0.18
Cxcr5Q04683 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cxcr5Q04683 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms