Protein–RNA interactions for Protein: P97742

Cpt1a, Carnitine O-palmitoyltransferase 1, liver isoform, mousemouse

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1aP97742 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpt1aP97742 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.27□□□□□ -0.12
Cpt1aP97742 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cpt1aP97742 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Gm25287-201ENSMUST00000103846 110 ntBASIC14.27□□□□□ -0.13
Cpt1aP97742 Gm22918-201ENSMUST00000103855 110 ntBASIC14.27□□□□□ -0.13
Cpt1aP97742 Gm2810-201ENSMUST00000118681 990 ntBASIC14.27□□□□□ -0.13
Cpt1aP97742 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpt1aP97742 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.27□□□□□ -0.13
Cpt1aP97742 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpt1aP97742 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpt1aP97742 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpt1aP97742 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.27□□□□□ -0.13
Cpt1aP97742 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cpt1aP97742 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpt1aP97742 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.27□□□□□ -0.13
Cpt1aP97742 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cpt1aP97742 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpt1aP97742 Carlr-201ENSMUST00000181515 2574 ntBASIC14.27□□□□□ -0.13
Cpt1aP97742 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.26□□□□□ -0.13
Cpt1aP97742 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.26□□□□□ -0.13
Cpt1aP97742 Gm15483-201ENSMUST00000120338 456 ntBASIC14.26□□□□□ -0.13
Cpt1aP97742 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.26□□□□□ -0.13
Cpt1aP97742 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.26□□□□□ -0.13
Cpt1aP97742 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.26□□□□□ -0.13
Cpt1aP97742 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpt1aP97742 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.26□□□□□ -0.13
Cpt1aP97742 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpt1aP97742 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.25□□□□□ -0.13
Cpt1aP97742 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cpt1aP97742 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpt1aP97742 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cpt1aP97742 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.25□□□□□ -0.13
Cpt1aP97742 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.25□□□□□ -0.13
Cpt1aP97742 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Gm24158-201ENSMUST00000175263 71 ntBASIC14.25□□□□□ -0.13
Cpt1aP97742 Gm27920-201ENSMUST00000183953 96 ntBASIC14.25□□□□□ -0.13
Cpt1aP97742 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.25□□□□□ -0.13
Cpt1aP97742 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Cpt1aP97742 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpt1aP97742 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms