Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.29■□□□□ 0.52
Nkx2-3P97334 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.29■□□□□ 0.52
Nkx2-3P97334 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.29■□□□□ 0.52
Nkx2-3P97334 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.29■□□□□ 0.52
Nkx2-3P97334 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.29■□□□□ 0.52
Nkx2-3P97334 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.29■□□□□ 0.52
Nkx2-3P97334 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-3P97334 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Gm15393-201ENSMUST00000120499 219 ntBASIC18.28■□□□□ 0.52
Nkx2-3P97334 Gm12882-201ENSMUST00000121696 517 ntBASIC18.28■□□□□ 0.52
Nkx2-3P97334 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Gm8602-201ENSMUST00000184045 607 ntBASIC18.28■□□□□ 0.52
Nkx2-3P97334 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-3P97334 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.27■□□□□ 0.52
Nkx2-3P97334 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nkx2-3P97334 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-3P97334 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-3P97334 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-3P97334 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-3P97334 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-3P97334 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-3P97334 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms