Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.29□□□□□ -0.44
SgcaP82350 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SgcaP82350 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.29□□□□□ -0.44
SgcaP82350 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SgcaP82350 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SgcaP82350 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.28□□□□□ -0.44
SgcaP82350 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.28□□□□□ -0.44
SgcaP82350 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SgcaP82350 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SgcaP82350 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.28□□□□□ -0.44
SgcaP82350 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.28□□□□□ -0.44
SgcaP82350 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.28□□□□□ -0.44
SgcaP82350 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SgcaP82350 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.28□□□□□ -0.44
SgcaP82350 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.28□□□□□ -0.44
SgcaP82350 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SgcaP82350 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
SgcaP82350 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
SgcaP82350 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
SgcaP82350 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
SgcaP82350 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SgcaP82350 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SgcaP82350 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SgcaP82350 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.27□□□□□ -0.45
SgcaP82350 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SgcaP82350 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.27□□□□□ -0.45
SgcaP82350 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SgcaP82350 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
SgcaP82350 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SgcaP82350 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SgcaP82350 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SgcaP82350 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
SgcaP82350 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SgcaP82350 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms