Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
CiitaP79621 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.85■□□□□ 0.13
CiitaP79621 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CiitaP79621 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CiitaP79621 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.85■□□□□ 0.13
CiitaP79621 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CiitaP79621 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.85■□□□□ 0.13
CiitaP79621 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CiitaP79621 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CiitaP79621 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.84■□□□□ 0.13
CiitaP79621 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CiitaP79621 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CiitaP79621 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CiitaP79621 Gm12428-201ENSMUST00000119844 727 ntBASIC15.84■□□□□ 0.13
CiitaP79621 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CiitaP79621 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CiitaP79621 Gm27680-201ENSMUST00000184192 160 ntBASIC15.84■□□□□ 0.13
CiitaP79621 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.84■□□□□ 0.13
CiitaP79621 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CiitaP79621 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CiitaP79621 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CiitaP79621 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CiitaP79621 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CiitaP79621 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CiitaP79621 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CiitaP79621 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.83■□□□□ 0.12
CiitaP79621 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.83■□□□□ 0.12
CiitaP79621 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.83■□□□□ 0.12
CiitaP79621 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Gm17837-201ENSMUST00000186435 985 ntBASIC15.83■□□□□ 0.12
CiitaP79621 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CiitaP79621 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CiitaP79621 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CiitaP79621 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CiitaP79621 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CiitaP79621 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Gm24543-201ENSMUST00000103867 82 ntBASIC15.82■□□□□ 0.12
CiitaP79621 Gm10275-202ENSMUST00000168697 495 ntBASIC15.82■□□□□ 0.12
CiitaP79621 Gm27631-201ENSMUST00000184163 466 ntBASIC15.82■□□□□ 0.12
CiitaP79621 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.82■□□□□ 0.12
CiitaP79621 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CiitaP79621 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.82■□□□□ 0.12
CiitaP79621 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Gm10275-201ENSMUST00000092620 635 ntBASIC15.82■□□□□ 0.12
CiitaP79621 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms