Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eif3eP60229 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Eif3eP60229 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.12■□□□□ 0.01
Eif3eP60229 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eif3eP60229 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eif3eP60229 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eif3eP60229 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Eif3eP60229 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
Eif3eP60229 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Eif3eP60229 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Eif3eP60229 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.11■□□□□ 0.01
Eif3eP60229 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.11■□□□□ 0.01
Eif3eP60229 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.11■□□□□ 0.01
Eif3eP60229 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.11■□□□□ 0.01
Eif3eP60229 Gm2272-201ENSMUST00000194903 582 ntBASIC15.11■□□□□ 0.01
Eif3eP60229 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.11■□□□□ 0.01
Eif3eP60229 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.11■□□□□ 0.01
Eif3eP60229 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Eif3eP60229 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Eif3eP60229 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Eif3eP60229 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Eif3eP60229 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.1■□□□□ 0.01
Eif3eP60229 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Eif3eP60229 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.1■□□□□ 0.01
Eif3eP60229 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Eif3eP60229 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.1■□□□□ 0.01
Eif3eP60229 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Eif3eP60229 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Eif3eP60229 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Eif3eP60229 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.1■□□□□ 0.01
Eif3eP60229 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Eif3eP60229 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Eif3eP60229 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.09■□□□□ 0.01
Eif3eP60229 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.09■□□□□ 0.01
Eif3eP60229 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.09■□□□□ 0.01
Eif3eP60229 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.09■□□□□ 0.01
Eif3eP60229 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.09■□□□□ 0.01
Eif3eP60229 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.09■□□□□ 0.01
Eif3eP60229 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Eif3eP60229 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Eif3eP60229 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Eif3eP60229 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Eif3eP60229 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Eif3eP60229 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms