Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nphp4P59240 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.65■□□□□ 0.74
Nphp4P59240 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nphp4P59240 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nphp4P59240 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Nphp4P59240 Gm6745-201ENSMUST00000199216 526 ntBASIC19.65■□□□□ 0.74
Nphp4P59240 Gm5425-201ENSMUST00000214125 459 ntBASIC19.65■□□□□ 0.74
Nphp4P59240 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC19.65■□□□□ 0.74
Nphp4P59240 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nphp4P59240 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nphp4P59240 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Nphp4P59240 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nphp4P59240 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC19.64■□□□□ 0.73
Nphp4P59240 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC19.64■□□□□ 0.73
Nphp4P59240 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19.64■□□□□ 0.73
Nphp4P59240 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC19.64■□□□□ 0.73
Nphp4P59240 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.64■□□□□ 0.73
Nphp4P59240 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nphp4P59240 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.64■□□□□ 0.73
Nphp4P59240 Gm9109-201ENSMUST00000120254 1405 ntBASIC19.64■□□□□ 0.73
Nphp4P59240 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Nphp4P59240 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nphp4P59240 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.63■□□□□ 0.73
Nphp4P59240 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nphp4P59240 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nphp4P59240 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nphp4P59240 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nphp4P59240 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nphp4P59240 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC19.63■□□□□ 0.73
Nphp4P59240 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.63■□□□□ 0.73
Nphp4P59240 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.63■□□□□ 0.73
Nphp4P59240 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.63■□□□□ 0.73
Nphp4P59240 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nphp4P59240 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Nphp4P59240 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nphp4P59240 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.63■□□□□ 0.73
Nphp4P59240 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
Nphp4P59240 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nphp4P59240 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC19.63■□□□□ 0.73
Nphp4P59240 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nphp4P59240 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nphp4P59240 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.63■□□□□ 0.73
Nphp4P59240 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nphp4P59240 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC19.62■□□□□ 0.73
Nphp4P59240 Gm15678-201ENSMUST00000117573 960 ntBASIC19.62■□□□□ 0.73
Nphp4P59240 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Nphp4P59240 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.62■□□□□ 0.73
Nphp4P59240 Gm4804-201ENSMUST00000182234 999 ntBASIC19.62■□□□□ 0.73
Nphp4P59240 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nphp4P59240 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nphp4P59240 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Gm19220-201ENSMUST00000222682 803 ntBASIC19.62■□□□□ 0.73
Nphp4P59240 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.62■□□□□ 0.73
Nphp4P59240 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nphp4P59240 Gm45630-201ENSMUST00000210243 1911 ntBASIC19.62■□□□□ 0.73
Nphp4P59240 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.61■□□□□ 0.73
Nphp4P59240 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Nphp4P59240 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nphp4P59240 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.61■□□□□ 0.73
Nphp4P59240 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms