Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.84■□□□□ 0.29
Tpm2P58774 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Tpm2P58774 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Tpm2P58774 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.84■□□□□ 0.29
Tpm2P58774 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.84■□□□□ 0.29
Tpm2P58774 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.84■□□□□ 0.29
Tpm2P58774 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.84■□□□□ 0.29
Tpm2P58774 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tpm2P58774 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm2P58774 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Tpm2P58774 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tpm2P58774 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tpm2P58774 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Tpm2P58774 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Tpm2P58774 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Tpm2P58774 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tpm2P58774 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tpm2P58774 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.83■□□□□ 0.28
Tpm2P58774 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tpm2P58774 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.83■□□□□ 0.28
Tpm2P58774 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.83■□□□□ 0.28
Tpm2P58774 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tpm2P58774 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm2P58774 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Gm42748-201ENSMUST00000199354 2341 ntBASIC16.82■□□□□ 0.28
Tpm2P58774 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.82■□□□□ 0.28
Tpm2P58774 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tpm2P58774 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Tpm2P58774 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.82■□□□□ 0.28
Tpm2P58774 Gm4459-201ENSMUST00000118750 468 ntBASIC16.82■□□□□ 0.28
Tpm2P58774 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Tpm2P58774 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.82■□□□□ 0.28
Tpm2P58774 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.82■□□□□ 0.28
Tpm2P58774 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Tpm2P58774 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm2P58774 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm2P58774 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Tpm2P58774 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tpm2P58774 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm2P58774 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm2P58774 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm2P58774 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm2P58774 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.81■□□□□ 0.28
Tpm2P58774 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.81■□□□□ 0.28
Tpm2P58774 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.81■□□□□ 0.28
Tpm2P58774 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.81■□□□□ 0.28
Tpm2P58774 Gm27704-201ENSMUST00000185094 107 ntBASIC16.81■□□□□ 0.28
Tpm2P58774 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms