Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm29667-201ENSMUST00000190817 490 ntBASIC14.55□□□□□ -0.08
Atxn1P54254 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atxn1P54254 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.55□□□□□ -0.08
Atxn1P54254 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atxn1P54254 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.55□□□□□ -0.08
Atxn1P54254 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atxn1P54254 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atxn1P54254 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Atxn1P54254 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atxn1P54254 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Atxn1P54254 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atxn1P54254 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atxn1P54254 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Atxn1P54254 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Atxn1P54254 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Atxn1P54254 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.54□□□□□ -0.08
Atxn1P54254 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.54□□□□□ -0.08
Atxn1P54254 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.54□□□□□ -0.08
Atxn1P54254 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.54□□□□□ -0.08
Atxn1P54254 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.54□□□□□ -0.08
Atxn1P54254 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Atxn1P54254 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atxn1P54254 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Atxn1P54254 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Atxn1P54254 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Atxn1P54254 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.53□□□□□ -0.08
Atxn1P54254 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Atxn1P54254 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Gm10499-201ENSMUST00000174094 934 ntBASIC14.53□□□□□ -0.08
Atxn1P54254 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Gm8318-201ENSMUST00000182954 872 ntBASIC14.53□□□□□ -0.08
Atxn1P54254 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.53□□□□□ -0.08
Atxn1P54254 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.53□□□□□ -0.08
Atxn1P54254 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Atxn1P54254 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.53□□□□□ -0.08
Atxn1P54254 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atxn1P54254 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atxn1P54254 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Atxn1P54254 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atxn1P54254 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Atxn1P54254 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atxn1P54254 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Atxn1P54254 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Atxn1P54254 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.52□□□□□ -0.08
Atxn1P54254 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atxn1P54254 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.52□□□□□ -0.08
Atxn1P54254 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Atxn1P54254 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.52□□□□□ -0.09
Atxn1P54254 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.52□□□□□ -0.09
Atxn1P54254 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.52□□□□□ -0.09
Atxn1P54254 Gm15483-201ENSMUST00000120338 456 ntBASIC14.52□□□□□ -0.09
Atxn1P54254 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Atxn1P54254 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Atxn1P54254 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.52□□□□□ -0.09
Atxn1P54254 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Atxn1P54254 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Atxn1P54254 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atxn1P54254 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Atxn1P54254 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atxn1P54254 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atxn1P54254 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Atxn1P54254 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Atxn1P54254 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms